CDS

Accession Number TCMCG002C05566
gbkey CDS
Protein Id XP_020084535.1
Location join(13771357..13771440,13772449..13772501,13773424..13773523,13773739..13773846,13775000..13775116,13775406..13775556,13776025..13776272,13777044..13777235,13777622..13777698,13777800..13777917,13779010..13779093,13780629..13780724,13780807..13780908,13782558..13782623,13782967..13783062,13783149..13783256,13783363..13783476,13783584..13783670,13784772..13784900,13785993..13786191,13786283..13786423,13786539..13786582,13787298..13787381,13788193..13788261,13788353..13788429,13789272..13789341,13789565..13789714,13789856..13789921,13790241..13790385,13790481..13790545,13790635..13790700,13791312..13791405,13791846..13791882,13791971..13792028,13792737..13792847,13793014..13793081,13793579..13793645,13793726..13793794,13793872..13793964)
Gene LOC109707570
GeneID 109707570
Organism Ananas comosus

Protein

Length 1300aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA371634
db_source XM_020228946.1
Definition Niemann-Pick C1 protein-like [Ananas comosus]

EGGNOG-MAPPER Annotation

COG_category I
Description Patched family
KEGG_TC 2.A.6.6
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
KEGG_ko ko:K12385        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04142        [VIEW IN KEGG]
ko04979        [VIEW IN KEGG]
map04142        [VIEW IN KEGG]
map04979        [VIEW IN KEGG]
GOs GO:0000323        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005496        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005764        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005887        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006486        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006869        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007041        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008202        [VIEW IN EMBL-EBI]
GO:0008206        [VIEW IN EMBL-EBI]
GO:0008289        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009100        [VIEW IN EMBL-EBI]
GO:0009101        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010876        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015485        [VIEW IN EMBL-EBI]
GO:0015850        [VIEW IN EMBL-EBI]
GO:0015918        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030301        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031226        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0032934        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042632        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043178        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043413        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048471        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0055088        [VIEW IN EMBL-EBI]
GO:0055092        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070085        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGAGGATCTCGTCGTCGGAGAGAAGCTCCGCCTCCTCCTATGGCGGAGTTCTCCCGTGGCGGTGGCGTTCCTACTTCAGGCTATTATTCTCTTTTTCCCAGCATGCGCACAGCAATCAAATGGTACATCAGGAAAAATATACGCAGAAGGATATTGTTCAATGTATGGCATTTGCGGACAGCGAAGTGATGGAAAGGTCTTGAACTGCCCCAATGAAACTCGTGCTGCCAAGCCGGATGACTTGTTCTCTGCGAAGATTCAAAGTTTGTGCCCAACAATCTCCGGCAATGTTTGTTGCACTGCTGACCAATTTGATACGCTACATGAAAATGTTCAACAAGCAATTCCTTTTCTTGTGGGGTGCCCAGCATGCTTGAGGAACTTCCTAAATATTTTCTGTGAGCTCTCTTGCTCTCCAAATCAAAGCCTTTTCATCAACGTGACTTCTATTGCAGAGGTCAATAATACTATGACTGTTGATGGCATAGATTTCTTTGTAACCAGTGAATACGGGGAAGAGTTATACAACTCATGCAAGGATGTGAAGTTTGGGACTATGAACACTCGTTCAATGGATTTTATTGGTGGAGCTGCTCAAAATTACACAGAGTGGTTCGCGTTTCTTGGTCGTCAAGCTAACCTGAATGAGCCTGGGTCACCTTATGCTGTATCATTTCGATCTGATATTAGTGATTCATCTGGAATGAAACCTCTAAACATAACAGTATATTCTTGTGGGGACCATTCTCTAGGTTGTTCATGCGGTGATTGTCCTTCTTCTTCTGTGTGCATGAATAATGCACCATCAGCTTCCCGTGGAAAAAGATCTTGCTCTTTTAAGATGGGATCTCTGAAGGTCAAATGCTTGGAATTTTCGTTAGCAATTGTGTACTTTGTCTTACTTGCAGCCTTTTTGACATGGGTTTCATTACATAGAAAACGAGAAAGAGTGGGCCTTTTTTCAAGGACAGAACCATTGCAAAATGTTCAGGATCAAAATCAGTTGCATTCTGTTAGCAAGGAGGAGCTTTCAGGTCGCCCTTTGCAGATAACTGAAGAGGTTCCTCTTGTGGCAGAGACACTACGACCTTCCGTTGTTCAAAGTTATATGACAAGTTTCTTCAGGAAGTATGGAACTTTTGTTGCGAGAAATCCAATTCTTGTTTTATGTTTATCATTAGCTGTTCCTCTTCTCCTCTGCATAGGCCTTATTCGTTTCAAGGTGGAGACACGGCCAGAGAAGCTGTGGGTTGGTCCTGGGAGTAAGGCAGCAGAGGAGAAACAATATTTTGATAGCCACCTTGCCCCTTTTTATCGGATTGAACAGCTTATTGTAGCAACCATTCCTGCTTCAAGGACTAGCAGTTCACCCACCATTGTTACTGGCAATAATATCCAGCTACTATTTGAAGTACAGAAGAAGGTTGATGGTCTACGTGCAAATTATTCTGGAAATATGGTATCTCTTTCTGACATTTGTTTTAAACCTCTTGGTGCTGATTGTGCCACTCAAAGTGTCTTACAGTATTTCCAAATGGATCCTCAAAAATATAATGATTTGGGTATTGACCATGCCAAGTATTGTTTTCAGCACTTCTCTTCTGATGAGTCCTGCCTGAGTGCATTTCAAGCTCCCCTAGATCCAAGTACGGCGCTGGGGGGATTTTCTGGAAATAACTACTCTGAGGCTTCTGCATTTGTCATAACATATCCTGTGAATAATAAAGTCGATAAAACAGGGGAAGAGAATGGACAGGCTGTAGCCTGGGAAGAGGCTTTCATTCATCTTATGAAGGAAGAAATAATGCCAATGATACAGATGCAAAACCTAACACTGGCTTTTTCATCTGAAAGTTCTATCCAGGAAGAACTAAAAAGAGAGAGTACCGCTGATGCGATAACTATATTGATAAGCTATCTTGTGATGTTTGCTTACATATCTTTTGCGCTTGGAGACAGTTTTCGTTGTTCTTCTTCCTTCATCATCTCATCTAAGGTTTTGCTTGGCTTGTCAGGTGTTGTTCTGGTTTTGCTTTCAGTACTAGGATCAATTGGGTTCTTTACTGCCATCGGTGTGAAGTCCACCCTCATCATAATGGAAGTTATTCCTTTTCTGGTTTTAGCTGTTGGAGTGGACAACATGTGTATCCTTGTACATGCGGTCAAACGCCAGCCATTAGCACTGTCCTTAGAAGGACGGATAAGCAATGCATTGGTGGAAGTTGGACCATCTATTACACTTGCAAGTTTATCCGAGTTTTTGGCTTTTGCTGTGAGTACTTTCACTCCAATGCCTGCATGCCGAGTGTTCTCCATGTTTGCCGCGTTGGCTGTCCTCTTAGACTTCGTTTTGCAAGTTACCGCTTTTGTTGCACTGATTGTCTTTGACTTTATAAGAGCTGAAGCTGGTAGGGTTGATTGTGTACCATGTATAAAAATTTCTCCAAGTAATGATCCTGATAAAGGTGACGGGCAACACAAGCTCGGTTTTCTTGCTCGTTATATGAAGGAGGTGCATGCACCTATTCTTGGCCTTCGAGGAGTCAAGGTTATAGTGATTGCTGTATTTGTTGGATTTGCTTTCACAAGCATTGTATTATCTACAAGACTCCAACCTGGTCTGGAGCAGAAAATTGTCCTTCCCCGGAATTCCTACCTACAGGATTATTTTGATGATCTTGCCAAATATCTTAGAATTGGACCACCATTATATTTTGTGGTAAAGGACTTCAACTACAGCTTGGAATCAAGTCAAACGAACCAGATATGTTCCATCAGCCAATGCAACTCTAACTCTCTCTTGAACGAGATTGCAAAAGCATCTTTAGTCCCTGAATCAAGTTACATTGCGAAGCCTGCTGCTTCATGGCTAGATGACTTCCTTATATGGTTGTCTCCGGAAGCCTTTAGTTGCTGCAGGGAATTTGTAAATGGAAGCTACTGTCCTCCAGATGATCAGCCACCCTGTTGTCAGCCTAGTCAAGGTTCTTGTGGAGTTACTGGAAAATGCAAAGACTGTACCACGTGTTTTCGGCATTCAGATCTACATGATGGCCGGCCATCCATAGCACAGTTCAAAGAAAAGCTTCCATGGTTTCTTAATGCATTGCCATCTTCTGATTGTGCTAAGGGTGGAAAAGGAGCTTATACTACTAATGTGAATCTTACTGGTTATGAACGTGGCATTATTCAAGCATCAGCATTTCGAACATACCACACTCCTCTAAATAAACAAACCGACTATGTGAACTCGATGAAGGCTGCACGGGATTTCAGTTCCAAAATTTCTGATTCTTTGCAGATGCAAATTTTCCCATATTCGGTGTTCTACATATTTTTTGAGCAATATCTGGATATATGGAAGACATCATTAATCAATATTTCTATTGGTCTTGGTGCTGTATTTATGGTTTGTCTGGTAGTTACCGGCAGCTTGTGGGCTTCAGCAATAATTTTGCTAGTGATAGCGATGATTATTCTGGATATGATGGGAGTCATGGGTATCCTCGATATTCAGCTGAATGCTATCTCTGTTGTAAACCTTGTTATGTCGATTGGAATTGCTGTTGAGTTCTGTGTTCATATAACACATGCCTTTTCGATAAGCAGGGGGGATAGAAACACACGAGCGAAAGAGGCTTTGTGTACTATGGGTGCTTCTGTATTCAGTGGAATCACACTGACGAAACTAGTAGGAGTTATTGTCCTGCGTTTTGCAAGATCAGAAGTTTTTGTGATCTATTATTTCCAAATGTATTTAGCACTGGTCCTTATCGGTTTCTTGCATGGGCTCGTGTTCCTCCCTGTGGTGCTGAGCATATGTGGTCCTCCTTCGAGGTGGGTGCCGACGGAACAGCAAGAAAGACAATCATCACCAGACTCAAATGAGCAAAACTAA
Protein:  
MAEDLVVGEKLRLLLWRSSPVAVAFLLQAIILFFPACAQQSNGTSGKIYAEGYCSMYGICGQRSDGKVLNCPNETRAAKPDDLFSAKIQSLCPTISGNVCCTADQFDTLHENVQQAIPFLVGCPACLRNFLNIFCELSCSPNQSLFINVTSIAEVNNTMTVDGIDFFVTSEYGEELYNSCKDVKFGTMNTRSMDFIGGAAQNYTEWFAFLGRQANLNEPGSPYAVSFRSDISDSSGMKPLNITVYSCGDHSLGCSCGDCPSSSVCMNNAPSASRGKRSCSFKMGSLKVKCLEFSLAIVYFVLLAAFLTWVSLHRKRERVGLFSRTEPLQNVQDQNQLHSVSKEELSGRPLQITEEVPLVAETLRPSVVQSYMTSFFRKYGTFVARNPILVLCLSLAVPLLLCIGLIRFKVETRPEKLWVGPGSKAAEEKQYFDSHLAPFYRIEQLIVATIPASRTSSSPTIVTGNNIQLLFEVQKKVDGLRANYSGNMVSLSDICFKPLGADCATQSVLQYFQMDPQKYNDLGIDHAKYCFQHFSSDESCLSAFQAPLDPSTALGGFSGNNYSEASAFVITYPVNNKVDKTGEENGQAVAWEEAFIHLMKEEIMPMIQMQNLTLAFSSESSIQEELKRESTADAITILISYLVMFAYISFALGDSFRCSSSFIISSKVLLGLSGVVLVLLSVLGSIGFFTAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQPLALSLEGRISNALVEVGPSITLASLSEFLAFAVSTFTPMPACRVFSMFAALAVLLDFVLQVTAFVALIVFDFIRAEAGRVDCVPCIKISPSNDPDKGDGQHKLGFLARYMKEVHAPILGLRGVKVIVIAVFVGFAFTSIVLSTRLQPGLEQKIVLPRNSYLQDYFDDLAKYLRIGPPLYFVVKDFNYSLESSQTNQICSISQCNSNSLLNEIAKASLVPESSYIAKPAASWLDDFLIWLSPEAFSCCREFVNGSYCPPDDQPPCCQPSQGSCGVTGKCKDCTTCFRHSDLHDGRPSIAQFKEKLPWFLNALPSSDCAKGGKGAYTTNVNLTGYERGIIQASAFRTYHTPLNKQTDYVNSMKAARDFSSKISDSLQMQIFPYSVFYIFFEQYLDIWKTSLINISIGLGAVFMVCLVVTGSLWASAIILLVIAMIILDMMGVMGILDIQLNAISVVNLVMSIGIAVEFCVHITHAFSISRGDRNTRAKEALCTMGASVFSGITLTKLVGVIVLRFARSEVFVIYYFQMYLALVLIGFLHGLVFLPVVLSICGPPSRWVPTEQQERQSSPDSNEQN